Chris Kubica, Technical Account Manager at Computomics, discusses the importance of pangenomes for modern plant breeding. He explains that traditional genomics relies on a single reference genome, which cannot capture the full genetic diversity of a species. This is a big problem in complex plant genomes, where major parts of breeding-line diversity can be absent from the standard reference. A pangenome combines multiple assemblies to represent more of a species’ variation and to unlock hard-to-find trait signals. Chris introduces Pantograph, Computomics’ “omics browser”, which allows users to visualize and explore structural variation and integrate diverse omics data such as gene expression and variant information. Hear about current and planned capabilities in this informative and enjoyable episode!

More:

• Pantograph website
• Chris Kubica on LinkedIn

This episode of the Computomics Podcast features Vanessa Prigge, potato breeder and R[&]D project manager at Saka Pflanzenzucht (Solana Group). She discusses her international research background, the unique challenges of potato breeding - such as vegetative propagation, complex genetics, and long breeding cycles - and the need for compromise-driven selection. Vanessa highlights two major projects: IPMorama, which promotes integrated pest management through resistant varieties, monitoring, and stakeholder collaboration, and POMORROW, which unlocks potato gene bank diversity for future-proof breeding. Together, these efforts aim to make potato breeding more sustainable, collaborative, and future-ready..

More information:

• Solana Main Page
• IPMorama Project Website
• POMORROW project (German language)
• Vanessa on LinkedIn
  

In this episode of the Computomics podcast, Vonnie Estes, VP of Innovation at the International Fresh Produce Association (IFPA), shares insights on the challenges the produce industry faces, particularly around climate change, pest management, and cold chain logistics. She discusses the importance of AI and machine learning in enhancing supply chain efficiency and food safety. Vonnie also highlights IFPA’s initiatives, such as "Supply Chain of the Future" and efforts to reduce single-use plastic in packaging. A grant program supports innovation in the produce sector, offering funding opportunities for startups in developing solutions to industry problems.

More:

• Vonnie Estes on LinkedIn
• International Fresh Produce Organization (IFPA)
• The Fresh Supply Chain of the Future
• Fresh Takes on Tech podcast